Marcus G. Martin
Contact Information
Interests

My interests include acting, bird photography, computational statistical mechanics, paleontology, and probability. Such wideranging interests
either make me a Renaissance man, or simply indicate that I am easily distracted.

My contributions to computational statistical mechanics are focussed on the use of Monte Carlo molecular simulation methods to predict equilibrium properties of fluids.
The tangible manifestation of my efforts is the freely available MCCCS Towhee Monte Carlo molecular simulation package (http://towhee.sourceforge.net).
Acting
Bird Photography and Ornithology
 Marcus Martin, contributed photos
(Ovenbird and
Orchard Oriole) for
Population Trends and Habitat Occurrence of Forest Birds on Southern National Forests, 19922004
Frank A. La Sorte, Frank R. Thompson III, Margaret K. Trani and Timothy J. Mersmann,
USDA Forest Service,
General Technical Report NRS9,
(June 2007).
 Marcus Martin, contributed photo
(Greater Flamingo) for
Where the birds are: a travel guide to over 1,000 parks, preserves, and sanctuaries,
Robert J. Dolezal,
The Reader's Digest Association, Inc.,
Pleasantville, New York,
ISBN 13:9780762108602
(2007).
 Marcus Martin, contributed photo
(Brown Pelican) for
'Marin Birdlog  May, June, July 2006', Newsletter of the Marin Audubon Society 49, 78, (September 2006).
 Marcus Martin, contributed cover photo
(Galapagos Penguin for
The Galapagos Penguin (Endangered and threatened animals),
Kim A. O'Connell,
Enslow Publishers Inc.,
New Jersey,
United States of America,
ISBN 0766050637
(2005).
 Marcus Martin, contributed photo
(Blacklegged Kittiwake)
for
"Birdland on the Niagara",
Jay Burney,
The Buffalo News, Section H,
December 18, 2005.
 Marcus G. Martin, contributed photos
(Whimbrel,
Snow Bunting,
Whitethroated Sparrow,
and Boreal Owl)
for
Gwìndòo Nành' Kak Geenjit Gwich'in Ginjik More Gwich'in Words About the Land,
Gwich'in Elders,
Gwich'in Renewable Resource Board,
Inuvik, Northern Teritory, Canada,
ISBN 0968264212
(2001).
 Marcus G. Martin contributed photos
(Rock Wren,
and Cedar Waxwing)
for
Cool Birds of Hells Canyon,
Chelsea Day, Amy Eberhardt, Sarah Fitzsimmons and Elsa Hansen,
Hells Canyon 4th Grade Educational Tour,
supported in part by the Idaho Humanities Council
(2004)
 M. Martin, contributed photo (Whooping Crane)
for 'Two Whooping Cranes Shot',
Bird Calls 5, 6, (March 2001).
 M. Martin, 'Northern Mockingbird, 13 May 2000, Fridley, Anoka County', The Loon 72, 222, (2000).
 M. Martin, contributed photo (Greater Roadrunner) for
'Featured Bird: Greater Roadrunner', The SKP Roadrunner 2, 1, (September 2000).
 Contributed photograph (Blacklegged Kittiwake) for
"Modelbased estimation of individual fitness", by W.A. Link, E.G. Cooch, and E. Cam; EURING 2000.
 M. Martin, 'American Tree Sparrow,
6 April 1999, Fridley, Anoka County', The Loon 71, 210, (19992000).
 M. Martin, 'Greater Yellowlegs,
25 April 1999, Lac Qui Parle County', The Loon 71, 197, (19992000).
 M. Martin, 'Varied Thrush , 19 December 1998, Fridley, Anoka County',
The Loon 71, 141, (1999).
 M.G. Martin 'Salt Lake trip list tops 120 species', Minnesota Birding 36:4, 8, (1999).
 M.G. Martin 'The Fridley Birding Trail', Minnesota Birding 36:2, 1415, (1999).
 M.G. Martin, contributed photos (
Yellowrumped Warbler,
Magnolia Warbler,
Northern Parula,
Virginia's Warbler)
for 'Tracking Migratory Birds Using Isotopes', Environmental Review 6:4, 1016, (1999).
 Contributed photograph (Blacklegged Kittiwake)
for "Of BUGS and Birds: An Introduction to Markov Chain Monte Carlo", by W.A. Link and E. Cam;
Colloquium, University of Miami Department of Mathematics. 2nd March 1999.
 Contributed photograph (Blacklegged Kittiwake)
for "Of BUGS and Birds: An Introduction to Markov Chain Monte Carlo", by W.A. Link and E. Cam;
The 3rd Conference on Statistics in Ecology and Environmental Monitoring, Otago, New Zealand. 9 December 1999.
 M. Martin, 'American Goldfinch , September 1997, Anoka County',
The Loon 70, 103, (1998).
 M. Martin, contributed photo (Yellowrumped Warbler) for
"The bird community index: A tool for assessing biotic integrity in the midAtlantic highlands",
by T.J. O'Connell, L.E. Jackson, and R.P. Brooks, Report No. 984 of the Penn State Cooperative Wetlands Center,
prepared for the U.S. Environmental Protection Agency, Region III, 1998.
 Contributed photograph (Bluegray Gnatcatcher)
for "The Roles of Model Selection and Hypothesis Testing in Natural Resource Studies  a Monitoring Perspective",
by W.A. Link and J.R. Sauer;
1998 Wildlife Society Meeting, Buffalo, NY.
 M. Martin, 'Red Crossbill,
2 February 1997, Pine County', The Loon 69, 143, (1997).
 Contributed photograph (Magnolia Warbler)
for "Modified BBS and Offroad Counts for Landscape Planning in Guatemala",
by C.S. Robbins, B.A. Dowell, J. Bucklin, and I. Arias;
1997 Annual meeting of the American Ornithologist's Union, Minneapolis, MN.
 Over 120 photographs contributed to the
Patuxent Bird Identification InfoCenter project.
G.A. Gough, J.R. Sauer, M. Iliff, 1997. Patuxent Bird Identification Infocenter. Version 97.1.
Patuxent Wildlife Research Center, Laurel, MD.
 All of the photographs on the Photobirder Complete Photographic Guide to
Birds of the World (abridged) web pages.
Computational Science Publications

M. G. Martin,
"MCCCS Towhee: a tool for Monte Carlo molecular simulation",
Mol. Simulat. 39 12121222 (2013)
http://dx.doi.org/10.1080/08927022.2013.828208

A. L. Frischknecht, M. G. Martin,
"Simulation of the Adsorption of Nucleotide Monophosphates on Carbon Nanotubes in Aqueous Solution",
J. Phys. Chem. C 112 62716278 (2008).

D. Sabo, S. Varma, M. G. Martin, S. B. Rempe,
"Studies of the Thermodynamic Properties of Hydrogen Gas in Bulk Water",
J. Phys. Chem. B 112 867876 (2008).

A. O. Yazaydin, M. G. Martin,
"Bubble point pressure estimates from Gibbs ensemble simulations",
Fluid Phase Equilib. 260 195198 (2007).
http://dx.doi.org/10.1016/j.fluid.2007.08.016

M. G. Martin,
"Comparison of the AMBER, CHARMM, COMPASS, GROMOS, OPLS, TraPPE and UFF force fields for Prediction of vaporliquid coexistence curves and
liquid densities",
Fluid Phase Equilib. 248 5055 (2006).
http://dx.doi.org/10.1016/j.fluid.2006.07.014

M. G. Martin and A. L. Frischknecht,
"Using arbitrary trial distributions to improve intramolecular sampling in configurationalbias Monte Carlo",
Mol. Phys. 104 24392456 (2006).
http://journalsonline.tandf.co.uk/link.asp?id=k7810tm53g57u84w

D. Sabo, S. B. Rempe, J. A. Greathouse, and M. G. Martin,
"Molecular studies of the structural properties of hydrogen gas in bulk water",
Mol. Sim. 32 269278 (2006).

A. H. Edwards, A. C. Pineda, P. A. Schultz, M. G. Martin, A. P. Thompson, H. P. Hjalmarson, and C. J. Umrigar,
"Electronic structure of intrinsic defects in crystalline germanium telluride",
Phys. Rev. B 73 045210113 (2006).

M. G. Martin and M. J. Biddy,
"Monte Carlo molecular simulation predictions for the heat of vaporization of acetone and butyramide",
Fluid Phase Equilib. 236 5357 (2005).

A. H. Edwards, A. C. Pineda, P. A. Schultz, M. G. Martin, A. P. Thompson and H. P. Hjalmarson,
"Theory of persistent, ptype, metallic conduction in cGeTe",
J. Phys.: Condens. Matter 17 L329L335 (2005).

L. J. D. Frink and M. Martin,
"A combined molecular simulationmolecular theory method applied to a polyatomic molecule in a dense solvent",
Condens. Matter Phys. 8 271280 (2005).

M. G. Martin and A. P. Thompson,
"Industrial property prediction using Towhee and LAMMPS",
Fluid Phase Equilib. 217 105110 (2004).

N. D. Zhuravlev, M. G. Martin and J. I. Siepmann,
"Vaporliquid phase equilibria of triacontane isomers: Deviations from the principle of corresponding states",
Fluid Phase Equilib. 202 307324 (2002).

C. D. Wick, M. G. Martin, J. I. Siepmann and M. R. Schure,
"Simulating Retention in GasLiquid Chromatography: Benzene, Toluene, and Xylene Solutes",
Intl. J. Thermophys. 22 111122 (2001).

M. Chandross, E. B. Webb III, G. S. Grest, M. G. Martin, A. P. Thompson and M. W. Roth,
"Dynamics of Exchange at GasZeolite Interfaces I: Pure Component nButane and Isobutane",
J. Phys. Chem. B 105 57005712 (2001).

M. G. Martin, A. P. Thompson and T. M. Nenoff,
"Effect of pressure, membrane thickness, and placement of control volumes on the flux of methane through thin silicalite
membranes: A dual control volume grand canonical molecular dynamics study",
J. Chem. Phys. 114 71747181 (2001).

M. G. Martin, J. I. Siepmann and M. R. Schure,
"Exploring multicomponent phase equlibria by Monte Carlo simulations: Towards a description of gasliquid chromatography",
in "Unified Chromatography", ACS Symposium Series 748 8295, eds. J.F. Parcher and T.L. Chester (2000).

C. D. Wick, M. G. Martin, B. Chen and J. I. Siepmann,
"Transferable Potentials for Phase Equilibria. 4. UnitedAtom Description of Linear and Branched Alkenes and Alkylbenzenes",
J. Phys. Chem. B 104 80088016 (2000).

M. G. Martin, B. Chen and J. I. Siepmann,
"Molecular Structure and Phase Diagram of the Binary Mixture of nHeptane and Supercritical Ethane:
A Gibbs Ensemble Monte Carlo Study",
J. Phys. Chem. B 104 24152423 (2000).

M. G. Martin, J. I. Siepmann and M. R. Schure,
"Simulating Retention in GasLiquid Chromatography",
J. Phys. Chem. B 103 1119111195 (1999).
[A news article about this paper appears on page 185A of the March 1, 2000 issue of Analytical Chemistry]

M. G. Martin and J. I. Siepmann,
"Novel configurationalbias Monte Carlo method for branched molecules.
Transferable Potentials for Phase Equilibria. 2. Unitedatom description of branched alkanes",
J. Phys. Chem. B 103 45084517 (1999).

M. G. Martin, N. D. Zhuravlev, B. Chen, P. W. Carr and J. I. Siepmann,
"Origins of the solvent chainlength dependence of Gibbs free energies of transfer",
J. Phys. Chem. B 103 29772980 (1999).

M. G. Martin and J. I. Siepmann,
"Calculating Gibbs free energies of transfer from Gibbs ensemble Monte Carlo simulations",
Theor. Chem. Acc. 99 347350 (1998).

T. J. H. Vlugt, M. G. Martin, B. Smit, J. I. Siepmann and R. Krishna,
"Improving the efficiency of the configurationalbias Monte Carlo algorithm",
Mol. Phys. 94 727733 (1998).

B. Chen, M. G. Martin and J. I. Siepmann,
"Thermodynamic Properties of the Williams, OPLSAA, and MMFF94 AllAtom Force Fields for Normal Alkanes",
J. Phys. Chem. B 102 25782586 (1998).

M. G. Martin and J. I. Siepmann,
"Transferable Potentials for Phase Equilibria. 1. UnitedAtom Description of nAlkanes",
J. Phys. Chem. B 102 25692577 (1998).

M. G. Martin, B. Chen and J. I. Siepmann,
"A novel Monte Carlo algorithm for polarizable force fields: Application to a fluctuating charge model for water",
J. Chem. Phys. 108 33833385 (1998).

M. G. Martin and J. I. Siepmann,
"Predicting multicomponent phase equilibria and free energies of transfer for alkanes by molecular simulation",
J. Am. Chem. Soc. 119 89218924 (1997).

J. I. Siepmann, M. G. Martin, C. J. Mundy and M. L. Klein,
"Intermolecular potentials for branched alkanes and the vapourliquid phase equilibria of nheptane,
2methylhexane, and 3ethylpentane",
Mol. Phys. 90 687693 (1997).

L. Forbes, M. Martin and M. Schmahl,
"How to keep your job as Provost",
The UMAP Journal 16 297311 (1995).

M. Martin, M.N. Rosing and M. Schmahl,
"Coal tipple operations, or why we hate thursdays",
The UMAP Journal 14 259270 (1993).
Computational Science Presentations
 "Monte Carlo Molecular Simulation: What is it and what does it do?",
invited talk
M. G. Martin,
Aerospace Engineering & Mechanics Department Seminar,
University of Minnesota,
Minneapolis, Minnesota (12/2011)
 "Towhee: A Tool for Computing Fluid Phase Equilbria",
invited talk
M. G. Martin,
National Institute of Standards and Technology,
Boulder, Colorado (1/2011)
 "Monte Carlo Molecular Simulation. What is it and what does it do?",
invited talk
M. G. Martin,
The 65th Annual Calorimetry Conference,
Colorado Springs, Colorado (7/2010)
 "Modern Statistical Mechanics: Pencils Optional",
invited talk
M. G. Martin,
Rice University,
Houston, Texas (1/2008)
 "Modern Statistical Mechanics: Pencils Optional",
invited talk
M. G. Martin,
Technical University of Denmark,
Lyngby, Denmark (11/2007)
 "Rantings of a Statistical Mechanic",
invited talk
M. G. Martin,
OpenEye CUP VIII,
Santa Fe, New Mexico (2/2007)
 "Why Sampling Efficiency is the Key to Monte Carlo Simulations",
invited talk
M. G. Martin,
SIAM Conference on Computational Science and Engineering,
Costa Mesa, California (2/2007)
 "Towhee Update and Visions for Open Source Software",
invited talk
M. G. Martin,
2006 Industrial Fluid Properties Simulation Collective Workshop,
Saint Paul, Minnesota (9/2006).
 "Using Arbitrary Trial Distributions to Improve Sampling in Configurationalbias Monte Carlo",
M. G. Martin and A. L. Frischknecht,
Foundations of Molecular Modeling and Simulation 2006,
Blaine, Washington (7/2006).
 "Recent Advances in Configurationalbias Monte Carlo"
invited talk
M. G. Martin, 19th Annual Workshop: Recent Developments in Computer Simulation Studies in
Condensed Matter Physics, University of Georgia, Athens, Georgia (2/2006).
 "Computing VaporLiquid Coexistence Curves for Metals",
M. G. Martin, 2005 Annual AIChE Meeting, Cincinnati, Ohio (10/2005).
 "Using the Monte Carlo Simulation Code Towhee to Predict Thermodynamic Properties of Fluids",
M. G. Martin, 2005 Spring AIChE Meeting, Atlanta, Georgia (4/2005).
 "Towhee: A Monte Carlo molecular simulation program for industrial applications",
M. G. Martin, 226th ACS National Meeting, New York, New York (9/2003).
 "Improving the configurationalbias Monte Carlo algorithm for complex fluids",
M. G. Martin, University of Minnesota, Minneapolis, Minessota (9/2002).
 "Towhee: A Molecular Simulation Tool for Fluid Phase Property Prediction",
invited talk
M. G. Martin, WrightPatterson Air Force Base, Dayton, Ohio (8/2002).
 "Towhee: A Molecular Simulation Tool for Fluid Phase Property Prediction",
invited talk
M. G. Martin, Dow Chemical, Midland, Michigan (4/2002).
 "Molecular Simulation for the Chemical Industry",
M. G. Martin, AIChE Spring Meeting, New Orleans, Louisianna (3/2002).
 "Using Configurationalbias Monte Carlo to Perform Flexible Drug Docking",
M. G. Martin, L. J. D. Frink 2001 AIChE Annual Meeting, Reno, Nevada (11/2001).
 "Simulation of nonequilibrium membrane transport",
invited talk
M. G. Martin, University of Cincinnati, Cincinnati, Ohio (4/2001).
 "Transport of Methane Through Thin Silicalite Membranes: A Dual Control Volume Grand Canonical Molecular Dynamics Study",
M. G. Martin, T. M. Nenoff, A. P. Thompson, 2000 AIChE Annual Meeting, Los Angeles, California (11/2000).
 "Comparison of the Amber, Charmm, Compass, Gromos, OPLS and TraPPE Force Fields",
M. G. Martin, 2000 AIChE Annual Meeting, Los Angeles, California (11/2000).
 "Assessing the accuracy of biological force fields for molecular simulation",
invited talk
M. G. Martin, Rush University, Chicago, Ilinois (10/2000).
 "Transport of methane through thin silicalite membranes: A dual control volume grand canonical molecular dynamics study",
M. G. Martin, 2000 Midwest Thermodynamics and Statistical Mechanics Conference, Minneapolis, Minnesota (5/2000).
 "TraPPE unitedatom force field for alkenes and aromatic hydrocarbons",
M. G. Martin, J. I. Siepmann and C. D. Wick, 1999 AIChE Annual Meeting, Dallas, Texas (11/1999).
 "Fluid Phase Behavior of alkanes: A Gibbs ensemble Monte Carlo Study",
M. G. Martin and J. I. Siepmann, Computational Science Graduate Fellowship Conference, Washington D.C. (7/1999).
 "Coupleddecoupled configurationalbias Monte Carlo",
M. G. Martin and J. I. Siepmann, 1999 Midwest Thermodynamics and Statistical Mechanics Conference, Detroit, Michigan (5/1999).
 "Molecular Structure and Phase Diagram of nHeptane in Supercritical Ethane: A Gibbsensemble Monte Carlo Study",
M. G. Martin and J. I. Siepmann, 1998 AIChE Annual Meeting, Miami Beach, Florida (11/1998).
 "Methods for Improving the Computational Efficiency of Configurationalbias Monte Carlo Simulations in the Gibbs Ensemble",
M. G. Martin and J. I. Siepmann, 1998 AIChE Annual Meeting, Miami Beach, Florida (11/1998).
 "A Novel Monte Carlo Algorithm for Polarizable Force Fields",
M. G. Martin and J. I. Siepmann, 1998 AIChE Annual Meeting, Miami Beach, Florida (11/1998).
 "Fluid Phase Behavior of Alkanes: A Gibbs Ensemble Monte Carlo Study",
M. G. Martin and J. I. Siepmann, Sandia National Laboratories, Albuquerque, New Mexico (6/1998).
 "Molecular structure and phase diagram of nheptane in supercritical ethane: A Gibbs ensemble Monte Carlo study",
M. G. Martin and J. I. Siepmann, 1998 Midwest Thermodynamics and Statistical Mechanics Conference,
Notre Dame, Indiana (5/1998).
 "Phase equilibria of alkane mixtures: A Gibbs ensemble Monte Carlo study",
M. G. Martin and J. I. Siepmann, 5th Chemical Congress of North America, Cancun, Quintana Roo, Mexico (11/1997).
 "Free energies of transfer with explicitly modeled solvents: A Gibbs Ensemble Monte Carlo study",
M. G. Martin and J. I. Siepmann, 214th ACS National Meeting, Las Vegas, Nevada (9/1997).
 "Phase equilibria of binary alkane mixtures: A Gibbs ensemble Monte Carlo study",
M. G. Martin and J. I. Siepmann, Computational Science Graduate Fellowship Biannual Meeting, Washington D.C. (7/1997).
 "Comparison of the OPLS, SKS, and TraPPE force fields for the nalkanes: A Gibbs ensemble Monte Carlo study",
M. G. Martin and J. I. Siepmann, 1997 Midwest Thermodynamics and Statistical Mechanics Conference,
Williams Bay, Wisconsin (5/1997).
 "Phase equilibria of binary alkane mixtures: A Gibbs ensemble Monte Carlo study",
M. G. Martin and J. I. Siepmann, 212th ACS National Meeting,
Symposium on General Session of the Division of Computers in Chemistry', Orlando, Florida (8/1996).
 D. A. Veazey, M. Martin, P. Klein, J. Benevento and R. L. Benner,
"The Effects of Oxygenated Fuel on Vehicle Emissions of Carbon Monoxide at Wintertime Temperatures in Fairbanks, AK",
Technical Report for the Fairbanks North Star Borough, 1992.
 "Aluacha Balaclava College",
L. Forbes, M. Martin, and M. Schmahl, Society for Industrial and Applied Mathematics Annual Meeting,
Symposium on Mathematical Contest in Modeling, Charlotte, North Carolina (10/1995).
 "Coal Tipple Operations",
M. Martin, M. R. Rosing, and M. Schmahl, Society for Industrial and Applied Mathematics Annual Meeting,
Symposium on Mathematical Contest in Modeling, Philadelphia, Pennsylvania (7/1993).
Education and Employment
20072011:
Director Useful Bias Incorporated, Edgewood, New Mexico
20012007:
Senior Member of Technical Staff Sandia National Laboratories, Albuquerque, New Mexico
19992001:
Limited Term Employee with G.S. Heffelfinger,
Computational Biology and Materials Technologies Department,
Sandia National Laboratories, Albuquerque, New Mexico
19951999:
Doctor of Philosophy,
Title of dissertation: 'Simulation of Phase Equilibria', Department of Chemistry,
University of Minnesota, Minneapolis, Minnesota
19971999:
DOE Fellow with J.I. Siepmann, Department of Chemistry, University of Minnesota, Minneapolis, Minnesota
1998:
DOE Fellowship Practicum with G.S. Heffelfinger, Computational Materials Science Department
Sandia National Laboratories, New Mexico
19961997:
Research Assistant with J.I. Siepmann, Department of Chemistry, University of Minnesota,
Minneapolis, Minnesota
19951997:
Teaching Assistant for General Chemistry Laboratory and Statistical Mechanics, Department of Chemistry,
University of Minnesota, Minneapolis, Minnesota
1995:
Instructor of Introduction to Mathematica (undergraduate level course)
Department of Mathematics, University of AlaskaFairbanks, Fairbanks, Alaska
19911995:
19931995:
19931994:
Teaching Assistant for Analytical and General Chemistry Laboratory Courses Department of Chemistry,
University of AlaskaFairbanks, Fairbanks, Alaska
Awards
 Champion of the First Industrial Fluid Properties Simulation Challenge (2002)
 Department of Energy Computational Science Graduate Fellowship (19971999)
 University of Minnesota Graduate School Fellowship (19951996)
 SIAMOutstanding winner of the Mathematical Contest in Modeling (1995)
 American Institute of Chemists Foundation Student Award (1995)
 Meritorious in the Mathematical Contest in Modeling (1994)
 American Chemical Society Analytical Chemistry Division Undergraduate Award (1994)
 SIAMOutstanding winner of the Mathematical Contest in Modeling (1993)
 National Merit Scholarship (19911995)
Funding Secured as a Principle Investigator
 Technologies for Developing Predictive Atomistic and CoarseGrained Force Fields for Ionic Liquid Property Prediction
 Molecular Simulation Tools for the Chemical Industry,
Funded by the Department of Energy Industrial Technologies Program, $750,000, June 2001 through July 2005.
Please see the MCCCS Towhee web pages for more information about the freely available code that resulted from this funding.
Send comments to: Marcus G. Martin
Last updated: December 28, 2015